Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 TSPY20P-201ENST00000450910 630 ntBASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV7S3A2A0A539 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 AP000692.2-201ENST00000608391 879 ntBASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 FAM197Y4-202ENST00000622692 608 ntBASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 AC093677.2-201ENST00000600169 1863 ntBASIC18.97■□□□□ 0.63
TCRBV7S3A2A0A539 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV7S3A2A0A539 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 PRORSD1P-201ENST00000295112 541 ntBASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 ITM2C-210ENST00000620962 501 ntBASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AC008764.6-201ENST00000595909 2069 ntBASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 AC099343.3-201ENST00000605834 2503 ntBASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TCRBV7S3A2A0A539 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV7S3A2A0A539 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms