Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 AL031985.4-201ENST00000642138 673 ntBASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 AL357033.4-201ENST00000617703 1807 ntBASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV27A0A087WT01 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 ABALON-201ENST00000629058 1903 ntBASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 NOC2LP1-202ENST00000452600 2235 ntBASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 BCL2-203ENST00000589955 5011 ntBASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 AC026271.3-201ENST00000571884 352 ntBASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 FAM197Y4-202ENST00000622692 608 ntBASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV27A0A087WT01 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 FAM207BP-201ENST00000447172 505 ntBASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 CKBP1-201ENST00000565489 1086 ntBASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 AC073195.1-201ENST00000607241 877 ntBASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms