Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 FGFR3P6-201ENST00000457012 610 ntBASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 AL512408.1-201ENST00000569378 2000 ntBASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 FAM197Y3-203ENST00000618346 717 ntBASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCH2Q9Y6C5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 IGHV3-22-201ENST00000520721 359 ntBASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCH2Q9Y6C5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 AC004967.1-201ENST00000453589 447 ntBASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 AC112482.1-201ENST00000492080 688 ntBASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.02■□□□□ 0.96
PTCH2Q9Y6C5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.02■□□□□ 0.95
PTCH2Q9Y6C5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PTCH2Q9Y6C5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.02■□□□□ 0.95
PTCH2Q9Y6C5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 RPS2P28-201ENST00000314255 741 ntBASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 YBX2P1-201ENST00000394192 760 ntBASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCH2Q9Y6C5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms