Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 IRX1P1-201ENST00000438849 1838 ntBASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 RN7SL471P-201ENST00000580476 299 ntBASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 AL121906.2-201ENST00000621597 723 ntBASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 PRKY-204ENST00000533551 1019 ntBASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 MTDHP1-201ENST00000605323 784 ntBASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 AC126763.1-201ENST00000552015 2118 ntBASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP4B1Q9Y6B7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 AC073592.3-201ENST00000625118 1834 ntBASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 AC233263.1-201ENST00000578059 224 ntBASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 PCDHA12-202ENST00000613593 2588 ntBASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP4B1Q9Y6B7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms