Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 AL109659.2-201ENST00000606809 1674 ntBASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 AC112777.1-201ENST00000540175 1423 ntBASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 AL355355.2-201ENST00000442321 338 ntBASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 Z99916.2-201ENST00000604037 246 ntBASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 AC079598.2-202ENST00000546624 1451 ntBASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 KRT8P45-201ENST00000414328 1447 ntBASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 AC008556.1-201ENST00000610908 2040 ntBASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CYP46A1Q9Y6A2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 AC026471.5-201ENST00000615068 467 ntBASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CYP46A1Q9Y6A2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CYP46A1Q9Y6A2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 AL354751.1-201ENST00000412768 1863 ntBASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms