Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
GPC6Q9Y625 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 WIZP1-201ENST00000531444 2299 ntBASIC17.68■□□□□ 0.42
GPC6Q9Y625 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC6Q9Y625 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.68■□□□□ 0.42
GPC6Q9Y625 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 GCSHP5-201ENST00000443090 522 ntBASIC17.67■□□□□ 0.42
GPC6Q9Y625 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 AC098590.1-201ENST00000468126 897 ntBASIC17.67■□□□□ 0.42
GPC6Q9Y625 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 AC009113.1-201ENST00000570267 2443 ntBASIC17.67■□□□□ 0.42
GPC6Q9Y625 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC6Q9Y625 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC6Q9Y625 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC6Q9Y625 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC6Q9Y625 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 TSPY23P-201ENST00000440136 739 ntBASIC17.65■□□□□ 0.42
GPC6Q9Y625 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC6Q9Y625 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC6Q9Y625 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
GPC6Q9Y625 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
GPC6Q9Y625 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
GPC6Q9Y625 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
GPC6Q9Y625 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms