Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 ATP5G1P1-201ENST00000448724 379 ntBASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 KRT18P56-201ENST00000507275 550 ntBASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAI2Q9Y5P3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 AL031598.1-201ENST00000561511 1773 ntBASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 AC093503.3-201ENST00000624917 2352 ntBASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 RNF165-205ENST00000588679 2904 ntBASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
RAI2Q9Y5P3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 AL138966.2-201ENST00000621997 464 ntBASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 Z98044.1-201ENST00000632503 1764 ntBASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.85■□□□□ 0.61
RAI2Q9Y5P3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms