Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.64■□□□□ 0.9
Q9Y3F1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9Y3F1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Q9Y3F1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.64■□□□□ 0.89
Q9Y3F1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.64■□□□□ 0.89
Q9Y3F1 AC011840.4-201ENST00000578471 627 ntBASIC20.64■□□□□ 0.89
Q9Y3F1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.64■□□□□ 0.89
Q9Y3F1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q9Y3F1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q9Y3F1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.64■□□□□ 0.89
Q9Y3F1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
Q9Y3F1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
Q9Y3F1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
Q9Y3F1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9Y3F1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.64■□□□□ 0.89
Q9Y3F1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Q9Y3F1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 AL163051.1-201ENST00000569214 1512 ntBASIC20.63■□□□□ 0.89
Q9Y3F1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9Y3F1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.63■□□□□ 0.89
Q9Y3F1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Q9Y3F1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.63■□□□□ 0.89
Q9Y3F1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9Y3F1 AP005901.3-202ENST00000581653 237 ntBASIC20.63■□□□□ 0.89
Q9Y3F1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.63■□□□□ 0.89
Q9Y3F1 REXO1L6P-202ENST00000619970 1078 ntBASIC20.63■□□□□ 0.89
Q9Y3F1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9Y3F1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9Y3F1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9Y3F1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.63■□□□□ 0.89
Q9Y3F1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.63■□□□□ 0.89
Q9Y3F1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9Y3F1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.62■□□□□ 0.89
Q9Y3F1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.62■□□□□ 0.89
Q9Y3F1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.62■□□□□ 0.89
Q9Y3F1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.62■□□□□ 0.89
Q9Y3F1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.62■□□□□ 0.89
Q9Y3F1 AKR1C7P-201ENST00000305623 895 ntBASIC20.62■□□□□ 0.89
Q9Y3F1 AL022342.1-201ENST00000400363 863 ntBASIC20.62■□□□□ 0.89
Q9Y3F1 SAPCD2P3-201ENST00000455031 850 ntBASIC20.62■□□□□ 0.89
Q9Y3F1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.62■□□□□ 0.89
Q9Y3F1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Q9Y3F1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.62■□□□□ 0.89
Q9Y3F1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Q9Y3F1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9Y3F1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
Q9Y3F1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.61■□□□□ 0.89
Q9Y3F1 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.61■□□□□ 0.89
Q9Y3F1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.61■□□□□ 0.89
Q9Y3F1 AC008687.5-201ENST00000593746 558 ntBASIC20.61■□□□□ 0.89
Q9Y3F1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.61■□□□□ 0.89
Q9Y3F1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Q9Y3F1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.61■□□□□ 0.89
Q9Y3F1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.61■□□□□ 0.89
Q9Y3F1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9Y3F1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms