Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4E1Q9UPM8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
AP4E1Q9UPM8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4E1Q9UPM8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4E1Q9UPM8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4E1Q9UPM8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 AC126763.1-201ENST00000552015 2118 ntBASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 AC104581.1-202ENST00000635932 2618 ntBASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 INGX-201ENST00000359239 846 ntBASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 MIR564-202ENST00000385049 94 ntBASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4E1Q9UPM8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 KRT8P45-201ENST00000414328 1447 ntBASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 AC020763.4-201ENST00000623414 4170 ntBASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
AP4E1Q9UPM8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 AC128688.1-201ENST00000487626 519 ntBASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 AC010653.2-201ENST00000623505 997 ntBASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 MYC-208ENST00000641036 567 ntBASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 AC009113.1-201ENST00000570267 2443 ntBASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4E1Q9UPM8 AC112777.1-201ENST00000540175 1423 ntBASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.34■□□□□ 0.69
AP4E1Q9UPM8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms