Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ZNF444P1-201ENST00000559497 298 ntBASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 GPALPP1-207ENST00000611650 899 ntBASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 AL121672.3-201ENST00000608644 468 ntBASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 AC112907.2-201ENST00000448639 330 ntBASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CR769767.2-201ENST00000622735 460 ntBASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 AC099343.3-201ENST00000605834 2503 ntBASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NOTCH3Q9UM47 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 AL732292.2-201ENST00000609649 430 ntBASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.4□□□□□ -0.11
NOTCH3Q9UM47 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 LINC01521-201ENST00000504184 1943 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms