Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CCNL1Q9UK58 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 FGFR3P6-201ENST00000457012 610 ntBASIC23.71■■□□□ 1.39
CCNL1Q9UK58 PGAM5P1-201ENST00000518923 814 ntBASIC23.71■■□□□ 1.39
CCNL1Q9UK58 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.71■■□□□ 1.39
CCNL1Q9UK58 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNL1Q9UK58 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
CCNL1Q9UK58 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CCNL1Q9UK58 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.7■■□□□ 1.39
CCNL1Q9UK58 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCNL1Q9UK58 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CCNL1Q9UK58 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 SCARNA2-201ENST00000458748 420 ntBASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AC055717.3-201ENST00000622967 595 ntBASIC23.7■■□□□ 1.38
CCNL1Q9UK58 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNL1Q9UK58 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 HMGN1P19-201ENST00000436976 333 ntBASIC23.69■■□□□ 1.38
CCNL1Q9UK58 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNL1Q9UK58 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 RCN1P2-201ENST00000398357 915 ntBASIC23.68■■□□□ 1.38
CCNL1Q9UK58 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNL1Q9UK58 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms