Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC52A3Q9NQ40 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC52A3Q9NQ40 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 NIFKP9-201ENST00000419265 221 ntBASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 AC008040.2-201ENST00000461049 708 ntBASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 AC131212.4-201ENST00000623606 975 ntBASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC52A3Q9NQ40 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 KRASP1-201ENST00000407852 552 ntBASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 KRT17P3-201ENST00000420566 1262 ntBASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC52A3Q9NQ40 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms