Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 AC034236.2-201ENST00000606662 1610 ntBASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GPCPD1Q9NPB8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 AC005332.1-201ENST00000577698 1310 ntBASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 Z98044.1-201ENST00000632503 1764 ntBASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 SPDYE13P-201ENST00000445314 798 ntBASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 MIR3917-201ENST00000580971 93 ntBASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 AC079602.3-201ENST00000623931 403 ntBASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 HOXB1-202ENST00000577092 1414 ntBASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
GPCPD1Q9NPB8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 HBZP1-201ENST00000354915 429 ntBASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 VENTXP5-201ENST00000523979 775 ntBASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AC104390.1-201ENST00000555663 520 ntBASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AC091076.1-201ENST00000610741 619 ntBASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AC083906.6-201ENST00000641366 219 ntBASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.61■■□□□ 1.05
GPCPD1Q9NPB8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 UPK3BP1-201ENST00000428678 509 ntBASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 AC010240.3-201ENST00000607688 395 ntBASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 AP000550.4-202ENST00000639755 178 ntBASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GPCPD1Q9NPB8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms