Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 MIR1238-201ENST00000408483 83 ntBASIC19.92■□□□□ 0.78
SYNCQ9H7C4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 AP005242.2-201ENST00000580065 1175 ntBASIC19.92■□□□□ 0.78
SYNCQ9H7C4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 PKD1P1-201ENST00000458669 6805 ntBASIC19.91■□□□□ 0.78
SYNCQ9H7C4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 CROCCP3-202ENST00000420820 1947 ntBASIC19.91■□□□□ 0.78
SYNCQ9H7C4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SYNCQ9H7C4 AC079598.2-202ENST00000546624 1451 ntBASIC19.91■□□□□ 0.78
SYNCQ9H7C4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 AL512353.2-201ENST00000448759 1962 ntBASIC19.9■□□□□ 0.78
SYNCQ9H7C4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 AL390955.1-201ENST00000428694 934 ntBASIC19.9■□□□□ 0.78
SYNCQ9H7C4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNCQ9H7C4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SYNCQ9H7C4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SYNCQ9H7C4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SYNCQ9H7C4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SYNCQ9H7C4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 AL596275.1-201ENST00000423464 877 ntBASIC19.89■□□□□ 0.77
SYNCQ9H7C4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCQ9H7C4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 OR6D1P-202ENST00000641007 5290 ntBASIC19.88■□□□□ 0.77
SYNCQ9H7C4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNCQ9H7C4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms