Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 CROCCP3-202ENST00000420820 1947 ntBASIC22.02■■□□□ 1.12
RNF41Q9H4P4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 AP000593.1-201ENST00000393668 712 ntBASIC22.02■■□□□ 1.12
RNF41Q9H4P4 RNF152P1-201ENST00000397754 604 ntBASIC22.02■■□□□ 1.12
RNF41Q9H4P4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 AC011558.1-201ENST00000623459 338 ntBASIC22.02■■□□□ 1.12
RNF41Q9H4P4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 MYC-208ENST00000641036 567 ntBASIC22.02■■□□□ 1.12
RNF41Q9H4P4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF41Q9H4P4 AL031598.1-201ENST00000561511 1773 ntBASIC22.02■■□□□ 1.11
RNF41Q9H4P4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RNF41Q9H4P4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF41Q9H4P4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RNF41Q9H4P4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 AC098818.2-201ENST00000564925 2320 ntBASIC22.01■■□□□ 1.11
RNF41Q9H4P4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 AC024243.1-201ENST00000609234 778 ntBASIC22.01■■□□□ 1.11
RNF41Q9H4P4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF41Q9H4P4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22■■□□□ 1.11
RNF41Q9H4P4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 ANO7L1-203ENST00000602586 1720 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 AC112777.1-201ENST00000540175 1423 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22■■□□□ 1.11
RNF41Q9H4P4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 TSPY5P-201ENST00000426936 936 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
RNF41Q9H4P4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22■■□□□ 1.11
RNF41Q9H4P4 DUX4L26-201ENST00000489078 1255 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 AC104390.1-201ENST00000555663 520 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 GCSHP2-201ENST00000560971 527 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 AL441883.1-201ENST00000566170 1045 ntBASIC22■■□□□ 1.11
RNF41Q9H4P4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22■■□□□ 1.11
RNF41Q9H4P4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RNF41Q9H4P4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22■■□□□ 1.11
RNF41Q9H4P4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RNF41Q9H4P4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RNF41Q9H4P4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
RNF41Q9H4P4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 SEC1P-202ENST00000473944 940 ntBASIC21.99■■□□□ 1.11
RNF41Q9H4P4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.99■■□□□ 1.11
RNF41Q9H4P4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms