Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS11Q9H270 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VPS11Q9H270 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS11Q9H270 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS11Q9H270 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS11Q9H270 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 UNC93B5-201ENST00000530315 699 ntBASIC18.82■□□□□ 0.6
VPS11Q9H270 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 AC142086.2-201ENST00000569753 217 ntBASIC18.82■□□□□ 0.6
VPS11Q9H270 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS11Q9H270 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
VPS11Q9H270 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS11Q9H270 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS11Q9H270 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS11Q9H270 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS11Q9H270 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS11Q9H270 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS11Q9H270 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VPS11Q9H270 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS11Q9H270 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
VPS11Q9H270 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS11Q9H270 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VPS11Q9H270 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS11Q9H270 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.8■□□□□ 0.6
VPS11Q9H270 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS11Q9H270 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS11Q9H270 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS11Q9H270 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS11Q9H270 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS11Q9H270 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS11Q9H270 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.79■□□□□ 0.6
VPS11Q9H270 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VPS11Q9H270 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 AC008403.3-201ENST00000598924 454 ntBASIC18.79■□□□□ 0.6
VPS11Q9H270 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
VPS11Q9H270 ESPNP-201ENST00000270691 2015 ntBASIC18.79■□□□□ 0.6
VPS11Q9H270 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS11Q9H270 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VPS11Q9H270 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS11Q9H270 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VPS11Q9H270 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS11Q9H270 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS11Q9H270 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS11Q9H270 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS11Q9H270 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.78■□□□□ 0.6
VPS11Q9H270 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VPS11Q9H270 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
VPS11Q9H270 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms