Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 AL031133.1-201ENST00000406807 723 ntBASIC20.49■□□□□ 0.87
TRIM6Q9C030 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 AL671277.2-201ENST00000458060 996 ntBASIC20.49■□□□□ 0.87
TRIM6Q9C030 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 AC093484.2-201ENST00000580996 2166 ntBASIC20.49■□□□□ 0.87
TRIM6Q9C030 AL032819.2-201ENST00000624543 2162 ntBASIC20.49■□□□□ 0.87
TRIM6Q9C030 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM6Q9C030 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM6Q9C030 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 FP475955.4-201ENST00000623131 1990 ntBASIC20.48■□□□□ 0.87
TRIM6Q9C030 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 RCC2P3-201ENST00000418112 1537 ntBASIC20.48■□□□□ 0.87
TRIM6Q9C030 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AL512353.2-201ENST00000448759 1962 ntBASIC20.48■□□□□ 0.87
TRIM6Q9C030 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM6Q9C030 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM6Q9C030 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM6Q9C030 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM6Q9C030 AC018445.3-201ENST00000624177 1945 ntBASIC20.47■□□□□ 0.87
TRIM6Q9C030 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 AC120498.9-201ENST00000339021 3867 ntBASIC20.46■□□□□ 0.87
TRIM6Q9C030 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 KRT18P38-201ENST00000449496 1282 ntBASIC20.46■□□□□ 0.87
TRIM6Q9C030 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 AC091076.1-201ENST00000610741 619 ntBASIC20.46■□□□□ 0.87
TRIM6Q9C030 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.46■□□□□ 0.87
TRIM6Q9C030 AL358472.4-201ENST00000633140 710 ntBASIC20.46■□□□□ 0.87
TRIM6Q9C030 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.46■□□□□ 0.87
TRIM6Q9C030 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM6Q9C030 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms