Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 TSPY7P-201ENST00000431358 1114 ntBASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
YIPF4Q9BSR8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 CKBP1-201ENST00000565489 1086 ntBASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 MIR4785-201ENST00000585005 73 ntBASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 AL049637.2-201ENST00000641778 930 ntBASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 BCL2-203ENST00000589955 5011 ntBASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
YIPF4Q9BSR8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
YIPF4Q9BSR8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 NUDT16P1-203ENST00000513809 620 ntBASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 HEIH-201ENST00000623091 1652 ntBASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.58■□□□□ 0.4
YIPF4Q9BSR8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 BX088651.1-201ENST00000540551 451 ntBASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
YIPF4Q9BSR8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms