Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SDF4Q9BRK5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SDF4Q9BRK5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 AL031598.1-201ENST00000561511 1773 ntBASIC21.7■■□□□ 1.06
SDF4Q9BRK5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 KRT18P21-201ENST00000515767 1272 ntBASIC21.7■■□□□ 1.06
SDF4Q9BRK5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDF4Q9BRK5 BCL2-203ENST00000589955 5011 ntBASIC21.69■■□□□ 1.06
SDF4Q9BRK5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 EGLN1P1-201ENST00000531623 762 ntBASIC21.69■■□□□ 1.06
SDF4Q9BRK5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 AC005363.2-201ENST00000618631 242 ntBASIC21.69■■□□□ 1.06
SDF4Q9BRK5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 WIZP1-201ENST00000531444 2299 ntBASIC21.69■■□□□ 1.06
SDF4Q9BRK5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SDF4Q9BRK5 Z98044.1-201ENST00000632503 1764 ntBASIC21.69■■□□□ 1.06
SDF4Q9BRK5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDF4Q9BRK5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.67■■□□□ 1.06
SDF4Q9BRK5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms