Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 RAP2CP1-202ENST00000605179 643 ntBASIC13.06□□□□□ -0.32
VPS25Q9BRG1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 PRAL-201ENST00000624952 3286 ntBASIC13.06□□□□□ -0.32
VPS25Q9BRG1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VPS25Q9BRG1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 AC134043.2-201ENST00000624206 2238 ntBASIC13.05□□□□□ -0.32
VPS25Q9BRG1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 RPS2P7-201ENST00000447334 885 ntBASIC13.05□□□□□ -0.32
VPS25Q9BRG1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS25Q9BRG1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS25Q9BRG1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS25Q9BRG1 OR2I1P-209ENST00000641730 5365 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms