Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 NIFKP9-201ENST00000419265 221 ntBASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 AC091390.4-202ENST00000476426 537 ntBASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 ESPNP-201ENST00000270691 2015 ntBASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 AC008556.1-201ENST00000610908 2040 ntBASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 RNA5SP413-201ENST00000516373 109 ntBASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 RCC2P3-201ENST00000418112 1537 ntBASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.57■□□□□ 0.4
CPPED1Q9BRF8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 AC124016.1-201ENST00000609552 612 ntBASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.56■□□□□ 0.4
CPPED1Q9BRF8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 HTR7P1-201ENST00000538670 1336 ntBASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms