Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LITAFQ99732 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
LITAFQ99732 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LITAFQ99732 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 AC124283.5-201ENST00000624661 1809 ntBASIC12.44□□□□□ -0.42
LITAFQ99732 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.44□□□□□ -0.42
LITAFQ99732 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.44□□□□□ -0.42
LITAFQ99732 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 AL031432.3-201ENST00000607698 485 ntBASIC12.44□□□□□ -0.42
LITAFQ99732 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LITAFQ99732 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LITAFQ99732 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 AC112777.1-201ENST00000540175 1423 ntBASIC12.44□□□□□ -0.42
LITAFQ99732 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.44□□□□□ -0.42
LITAFQ99732 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LITAFQ99732 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.43□□□□□ -0.42
LITAFQ99732 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.43□□□□□ -0.42
LITAFQ99732 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LITAFQ99732 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.43□□□□□ -0.42
LITAFQ99732 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.43□□□□□ -0.42
LITAFQ99732 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.43□□□□□ -0.42
LITAFQ99732 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 AC013268.1-206ENST00000638368 961 ntBASIC12.43□□□□□ -0.42
LITAFQ99732 AC112229.1-201ENST00000639295 961 ntBASIC12.43□□□□□ -0.42
LITAFQ99732 AC068587.9-201ENST00000641814 219 ntBASIC12.43□□□□□ -0.42
LITAFQ99732 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LITAFQ99732 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.43□□□□□ -0.42
LITAFQ99732 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 RCC2P6-201ENST00000526625 1557 ntBASIC12.43□□□□□ -0.42
LITAFQ99732 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.43□□□□□ -0.42
LITAFQ99732 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LITAFQ99732 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LITAFQ99732 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.42□□□□□ -0.42
LITAFQ99732 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.42□□□□□ -0.42
LITAFQ99732 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 AC096631.2-201ENST00000436136 790 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms