Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 AC099398.1-201ENST00000567919 2776 ntBASIC14.11□□□□□ -0.15
AP1S3Q96PC3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 KRT18P61-201ENST00000585825 1298 ntBASIC14.11□□□□□ -0.15
AP1S3Q96PC3 CYP2T3P-201ENST00000601990 817 ntBASIC14.11□□□□□ -0.15
AP1S3Q96PC3 AC069236.1-201ENST00000604339 616 ntBASIC14.11□□□□□ -0.15
AP1S3Q96PC3 AC008694.1-202ENST00000636953 945 ntBASIC14.11□□□□□ -0.15
AP1S3Q96PC3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S3Q96PC3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 AC104581.1-202ENST00000635932 2618 ntBASIC14.1□□□□□ -0.15
AP1S3Q96PC3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S3Q96PC3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms