Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ALPK3Q96L96 AC023274.1-201ENST00000418278 595 ntBASIC20.33■□□□□ 0.85
ALPK3Q96L96 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.33■□□□□ 0.85
ALPK3Q96L96 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.33■□□□□ 0.85
ALPK3Q96L96 SPCS2P1-201ENST00000561636 679 ntBASIC20.33■□□□□ 0.85
ALPK3Q96L96 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ALPK3Q96L96 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALPK3Q96L96 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.33■□□□□ 0.85
ALPK3Q96L96 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.33■□□□□ 0.85
ALPK3Q96L96 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALPK3Q96L96 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALPK3Q96L96 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ALPK3Q96L96 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 MIR3687-2-201ENST00000577708 61 ntBASIC20.33■□□□□ 0.84
ALPK3Q96L96 MIR3687-1-201ENST00000614492 61 ntBASIC20.33■□□□□ 0.84
ALPK3Q96L96 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.33■□□□□ 0.84
ALPK3Q96L96 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 AC132008.2-207ENST00000454517 770 ntBASIC20.32■□□□□ 0.84
ALPK3Q96L96 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.32■□□□□ 0.84
ALPK3Q96L96 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.32■□□□□ 0.84
ALPK3Q96L96 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.32■□□□□ 0.84
ALPK3Q96L96 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ALPK3Q96L96 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.32■□□□□ 0.84
ALPK3Q96L96 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALPK3Q96L96 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.32■□□□□ 0.84
ALPK3Q96L96 AP005117.1-201ENST00000584346 1413 ntBASIC20.31■□□□□ 0.84
ALPK3Q96L96 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.31■□□□□ 0.84
ALPK3Q96L96 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.31■□□□□ 0.84
ALPK3Q96L96 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALPK3Q96L96 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
ALPK3Q96L96 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALPK3Q96L96 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALPK3Q96L96 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALPK3Q96L96 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALPK3Q96L96 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALPK3Q96L96 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALPK3Q96L96 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.3■□□□□ 0.84
ALPK3Q96L96 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms