Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITCHQ96J02 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ITCHQ96J02 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.81■□□□□ 0.44
ITCHQ96J02 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.81■□□□□ 0.44
ITCHQ96J02 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.81■□□□□ 0.44
ITCHQ96J02 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ITCHQ96J02 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.81■□□□□ 0.44
ITCHQ96J02 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.81■□□□□ 0.44
ITCHQ96J02 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.81■□□□□ 0.44
ITCHQ96J02 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.81■□□□□ 0.44
ITCHQ96J02 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ITCHQ96J02 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ITCHQ96J02 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 KRT8P11-201ENST00000409686 1436 ntBASIC17.81■□□□□ 0.44
ITCHQ96J02 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.81■□□□□ 0.44
ITCHQ96J02 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITCHQ96J02 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.8■□□□□ 0.44
ITCHQ96J02 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ITCHQ96J02 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
ITCHQ96J02 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.8■□□□□ 0.44
ITCHQ96J02 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 KRASP1-201ENST00000407852 552 ntBASIC17.8■□□□□ 0.44
ITCHQ96J02 AC239809.2-201ENST00000415381 517 ntBASIC17.8■□□□□ 0.44
ITCHQ96J02 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.8■□□□□ 0.44
ITCHQ96J02 AC026366.1-201ENST00000488803 879 ntBASIC17.8■□□□□ 0.44
ITCHQ96J02 PRSS44-201ENST00000515154 1146 ntBASIC17.8■□□□□ 0.44
ITCHQ96J02 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.8■□□□□ 0.44
ITCHQ96J02 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ITCHQ96J02 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ITCHQ96J02 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
ITCHQ96J02 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 KRT8P32-201ENST00000512863 1461 ntBASIC17.8■□□□□ 0.44
ITCHQ96J02 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.8■□□□□ 0.44
ITCHQ96J02 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ITCHQ96J02 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ITCHQ96J02 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 AL355802.2-201ENST00000402069 882 ntBASIC17.79■□□□□ 0.44
ITCHQ96J02 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.79■□□□□ 0.44
ITCHQ96J02 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.79■□□□□ 0.44
ITCHQ96J02 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 AL445675.2-201ENST00000620291 557 ntBASIC17.79■□□□□ 0.44
ITCHQ96J02 AC131212.4-201ENST00000623606 975 ntBASIC17.79■□□□□ 0.44
ITCHQ96J02 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 AL023875.1-201ENST00000640777 796 ntBASIC17.79■□□□□ 0.44
ITCHQ96J02 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 KRT8P3-201ENST00000519669 1449 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms