Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 SCARNA2-201ENST00000458748 420 ntBASIC21.82■■□□□ 1.08
CDCA5Q96FF9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA5Q96FF9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CDCA5Q96FF9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 AC092667.1-201ENST00000434301 2586 ntBASIC21.8■■□□□ 1.08
CDCA5Q96FF9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 RCN1P2-201ENST00000398357 915 ntBASIC21.8■■□□□ 1.08
CDCA5Q96FF9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA5Q96FF9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 MTDHP3-201ENST00000594186 672 ntBASIC21.79■■□□□ 1.08
CDCA5Q96FF9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA5Q96FF9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 AL139424.1-201ENST00000607572 797 ntBASIC21.78■■□□□ 1.08
CDCA5Q96FF9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CDCA5Q96FF9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms