Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AC113410.3-201ENST00000623366 203 ntBASIC19.76■□□□□ 0.75
TRIM11Q96F44 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AL049637.2-201ENST00000641778 930 ntBASIC19.76■□□□□ 0.75
TRIM11Q96F44 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM11Q96F44 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM11Q96F44 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 AC097488.1-201ENST00000507834 756 ntBASIC19.75■□□□□ 0.75
TRIM11Q96F44 KRT18P41-201ENST00000518924 1277 ntBASIC19.75■□□□□ 0.75
TRIM11Q96F44 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.75■□□□□ 0.75
TRIM11Q96F44 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 AL499627.1-201ENST00000569373 2188 ntBASIC19.75■□□□□ 0.75
TRIM11Q96F44 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 AL354751.1-201ENST00000412768 1863 ntBASIC19.75■□□□□ 0.75
TRIM11Q96F44 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM11Q96F44 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM11Q96F44 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 AL355355.2-201ENST00000442321 338 ntBASIC19.74■□□□□ 0.75
TRIM11Q96F44 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM11Q96F44 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM11Q96F44 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 MCCD1P1-208ENST00000445732 328 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms