Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF25Q96BH1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF25Q96BH1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF25Q96BH1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF25Q96BH1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF25Q96BH1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF25Q96BH1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF25Q96BH1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF25Q96BH1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF25Q96BH1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF25Q96BH1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 AC004951.3-201ENST00000418645 1148 ntBASIC19.64■□□□□ 0.73
RNF25Q96BH1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 AC008040.2-201ENST00000461049 708 ntBASIC19.64■□□□□ 0.73
RNF25Q96BH1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 AF186192.3-201ENST00000583427 947 ntBASIC19.64■□□□□ 0.73
RNF25Q96BH1 FAM197Y4-202ENST00000622692 608 ntBASIC19.64■□□□□ 0.73
RNF25Q96BH1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 KRT16P1-201ENST00000399124 1418 ntBASIC19.64■□□□□ 0.73
RNF25Q96BH1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 HEIH-201ENST00000623091 1652 ntBASIC19.64■□□□□ 0.73
RNF25Q96BH1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF25Q96BH1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF25Q96BH1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 AL353807.1-201ENST00000427475 662 ntBASIC19.63■□□□□ 0.73
RNF25Q96BH1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF25Q96BH1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 AC126763.1-201ENST00000552015 2118 ntBASIC19.63■□□□□ 0.73
RNF25Q96BH1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF25Q96BH1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 PRSS44-201ENST00000515154 1146 ntBASIC19.62■□□□□ 0.73
RNF25Q96BH1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 AC011298.2-201ENST00000617989 482 ntBASIC19.62■□□□□ 0.73
RNF25Q96BH1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF25Q96BH1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 LTB4R2-202ENST00000528054 3092 ntBASIC19.62■□□□□ 0.73
RNF25Q96BH1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF25Q96BH1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms