Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA4DQ92854 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SEMA4DQ92854 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA4DQ92854 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA4DQ92854 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA4DQ92854 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA4DQ92854 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.08■□□□□ 0.81
SEMA4DQ92854 AC128688.1-201ENST00000487626 519 ntBASIC20.08■□□□□ 0.81
SEMA4DQ92854 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA4DQ92854 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA4DQ92854 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA4DQ92854 WWOX-216ENST00000569818 525 ntBASIC20.08■□□□□ 0.81
SEMA4DQ92854 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.08■□□□□ 0.81
SEMA4DQ92854 AC145285.6-201ENST00000604632 637 ntBASIC20.08■□□□□ 0.81
SEMA4DQ92854 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.08■□□□□ 0.81
SEMA4DQ92854 AC073912.3-201ENST00000624414 853 ntBASIC20.08■□□□□ 0.81
SEMA4DQ92854 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SEMA4DQ92854 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA4DQ92854 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA4DQ92854 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA4DQ92854 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SEMA4DQ92854 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA4DQ92854 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.08■□□□□ 0.8
SEMA4DQ92854 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.08■□□□□ 0.8
SEMA4DQ92854 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
SEMA4DQ92854 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SEMA4DQ92854 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.07■□□□□ 0.8
SEMA4DQ92854 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA4DQ92854 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA4DQ92854 KRT18P41-201ENST00000518924 1277 ntBASIC20.07■□□□□ 0.8
SEMA4DQ92854 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 AC012306.2-201ENST00000609350 630 ntBASIC20.07■□□□□ 0.8
SEMA4DQ92854 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA4DQ92854 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SEMA4DQ92854 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA4DQ92854 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 AC133561.5-201ENST00000635547 218 ntBASIC20.06■□□□□ 0.8
SEMA4DQ92854 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA4DQ92854 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.06■□□□□ 0.8
SEMA4DQ92854 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 AC090164.3-201ENST00000610780 2143 ntBASIC20.05■□□□□ 0.8
SEMA4DQ92854 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA4DQ92854 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SEMA4DQ92854 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms