Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 FP475955.4-201ENST00000623131 1990 ntBASIC19.13■□□□□ 0.65
SCG3Q8WXD2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 TMPOP1-202ENST00000424642 1267 ntBASIC19.12■□□□□ 0.65
SCG3Q8WXD2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 C2orf69P3-201ENST00000565542 1120 ntBASIC19.12■□□□□ 0.65
SCG3Q8WXD2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 AL133373.2-201ENST00000623187 2828 ntBASIC19.12■□□□□ 0.65
SCG3Q8WXD2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 AP000997.3-201ENST00000623333 2250 ntBASIC19.12■□□□□ 0.65
SCG3Q8WXD2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCG3Q8WXD2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 AL390955.1-201ENST00000428694 934 ntBASIC19.11■□□□□ 0.65
SCG3Q8WXD2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
SCG3Q8WXD2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.11■□□□□ 0.65
SCG3Q8WXD2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 AC104581.1-202ENST00000635932 2618 ntBASIC19.1■□□□□ 0.65
SCG3Q8WXD2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 AL390961.4-201ENST00000623958 2535 ntBASIC19.1■□□□□ 0.65
SCG3Q8WXD2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 AC092865.7-201ENST00000641832 219 ntBASIC19.1■□□□□ 0.65
SCG3Q8WXD2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCG3Q8WXD2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms