Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM4Q8WVI0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SMIM4Q8WVI0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM4Q8WVI0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM4Q8WVI0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM4Q8WVI0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SMIM4Q8WVI0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 KRT18P16-201ENST00000510337 1294 ntBASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM4Q8WVI0 RCC2P6-201ENST00000526625 1557 ntBASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 TSPY23P-201ENST00000440136 739 ntBASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMIM4Q8WVI0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SMIM4Q8WVI0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
SMIM4Q8WVI0 AC124283.5-201ENST00000624661 1809 ntBASIC15.96■□□□□ 0.14
SMIM4Q8WVI0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SMIM4Q8WVI0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.96■□□□□ 0.14
SMIM4Q8WVI0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SMIM4Q8WVI0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 AC068587.9-201ENST00000641814 219 ntBASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 PP12613-201ENST00000424958 2230 ntBASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms