Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 KRT18P57-201ENST00000443599 1254 ntBASIC19.76■□□□□ 0.75
UBA3Q8TBC4 AC009947.2-201ENST00000444014 672 ntBASIC19.76■□□□□ 0.75
UBA3Q8TBC4 ATP5G1P1-201ENST00000448724 379 ntBASIC19.76■□□□□ 0.75
UBA3Q8TBC4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 WWOX-216ENST00000569818 525 ntBASIC19.76■□□□□ 0.75
UBA3Q8TBC4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.76■□□□□ 0.75
UBA3Q8TBC4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 AL138966.2-201ENST00000621997 464 ntBASIC19.75■□□□□ 0.75
UBA3Q8TBC4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA3Q8TBC4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 AC141257.4-201ENST00000634557 245 ntBASIC19.74■□□□□ 0.75
UBA3Q8TBC4 AC136944.6-201ENST00000634818 245 ntBASIC19.74■□□□□ 0.75
UBA3Q8TBC4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 AC073508.3-201ENST00000619697 1419 ntBASIC19.74■□□□□ 0.75
UBA3Q8TBC4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA3Q8TBC4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.73■□□□□ 0.75
UBA3Q8TBC4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.73■□□□□ 0.75
UBA3Q8TBC4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms