Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 AC126763.1-201ENST00000552015 2118 ntBASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC2Q8TAQ2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 SLC25A1P2-201ENST00000430693 912 ntBASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 CCR12P-201ENST00000446203 998 ntBASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 ECEL1P2-202ENST00000465689 757 ntBASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 AC116562.4-202ENST00000641738 218 ntBASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.87■■□□□ 1.09
SMARCC2Q8TAQ2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 AL357033.4-201ENST00000617703 1807 ntBASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 INGX-201ENST00000359239 846 ntBASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 FAM210CP-201ENST00000445714 574 ntBASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SMARCC2Q8TAQ2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 SLC25A3P1-201ENST00000443844 931 ntBASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 AC008622.2-201ENST00000617006 1229 ntBASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMARCC2Q8TAQ2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms