Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 KRT8P45-201ENST00000414328 1447 ntBASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 MIR1238-201ENST00000408483 83 ntBASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 KRT18P21-201ENST00000515767 1272 ntBASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH19Q8TAB3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 MIR564-202ENST00000385049 94 ntBASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 MCCD1P1-208ENST00000445732 328 ntBASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH19Q8TAB3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 SLC25A1P2-201ENST00000430693 912 ntBASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 AC097493.4-201ENST00000641197 219 ntBASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH19Q8TAB3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH19Q8TAB3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDH19Q8TAB3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH19Q8TAB3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH19Q8TAB3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDH19Q8TAB3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 AC112777.1-201ENST00000540175 1423 ntBASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 MMP23A-201ENST00000234610 1017 ntBASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 AL353719.1-201ENST00000566847 864 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms