Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC024243.1-201ENST00000609234 778 ntBASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 AP000867.3-201ENST00000524675 377 ntBASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF248Q8NDW4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF248Q8NDW4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF248Q8NDW4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.83■□□□□ 0.45
ZNF248Q8NDW4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
ZNF248Q8NDW4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF248Q8NDW4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.83■□□□□ 0.45
ZNF248Q8NDW4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 DRAXINP1-201ENST00000437611 948 ntBASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ZNF248Q8NDW4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 TSPY22P-201ENST00000427496 604 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC079781.3-201ENST00000449110 356 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC079776.4-201ENST00000511039 504 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC106795.1-205ENST00000512851 1056 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC012615.1-201ENST00000565797 1299 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF248Q8NDW4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms