Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 KRT8P3-201ENST00000519669 1449 ntBASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 INGX-201ENST00000359239 846 ntBASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 SLC25A1P2-201ENST00000430693 912 ntBASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf42Q8N5U0 AC020763.4-201ENST00000623414 4170 ntBASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AC092338.2-201ENST00000568827 1415 ntBASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 EGLN1P1-201ENST00000531623 762 ntBASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 NAPSB-206ENST00000562112 1266 ntBASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 C2orf69P3-201ENST00000565542 1120 ntBASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AC097493.4-201ENST00000641197 219 ntBASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf42Q8N5U0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 AL353719.1-201ENST00000566847 864 ntBASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 AC008622.2-201ENST00000617006 1229 ntBASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 BX323043.1-201ENST00000641006 1765 ntBASIC15.53■□□□□ 0.08
C11orf42Q8N5U0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms