Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 AC091607.1-201ENST00000490318 1060 ntBASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A3Q8N4M1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 FAM197Y8-203ENST00000450145 560 ntBASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 AL773604.1-201ENST00000617417 272 ntBASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC44A3Q8N4M1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 AC092667.1-201ENST00000434301 2586 ntBASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 AC006333.2-201ENST00000607957 2099 ntBASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 AC034236.2-201ENST00000606662 1610 ntBASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A3Q8N4M1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 AC073130.3-201ENST00000624389 2278 ntBASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 Z82202.1-201ENST00000623446 1880 ntBASIC19.08■□□□□ 0.65
SLC44A3Q8N4M1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 MINOS1P3-201ENST00000457048 203 ntBASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 SLC25A1P1-201ENST00000528351 927 ntBASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 AC011840.4-201ENST00000578471 627 ntBASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A3Q8N4M1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 AL353692.3-201ENST00000407031 1396 ntBASIC19.07■□□□□ 0.64
SLC44A3Q8N4M1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms