Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 AC063952.2-201ENST00000498792 1227 ntBASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 AL499627.1-201ENST00000569373 2188 ntBASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 KRT18P41-201ENST00000518924 1277 ntBASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 AC022616.7-201ENST00000525383 220 ntBASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf40Q8IXQ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 MIR1224-201ENST00000408193 85 ntBASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 AC104390.1-201ENST00000555663 520 ntBASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 AC010331.1-201ENST00000611423 582 ntBASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf40Q8IXQ3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.21■□□□□ 0.34
C9orf40Q8IXQ3 KRT8P50-201ENST00000562022 1438 ntBASIC17.21■□□□□ 0.34
C9orf40Q8IXQ3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C9orf40Q8IXQ3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 AC093503.3-201ENST00000624917 2352 ntBASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 AL359075.1-203ENST00000462729 1002 ntBASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.2■□□□□ 0.34
C9orf40Q8IXQ3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms