Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 CYP2D8P-201ENST00000433633 1490 ntBASIC17.52■□□□□ 0.4
CCDC71Q8IV32 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 ARMC10P1-201ENST00000313754 855 ntBASIC17.52■□□□□ 0.4
CCDC71Q8IV32 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AC005521.1-201ENST00000393351 872 ntBASIC17.52■□□□□ 0.4
CCDC71Q8IV32 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 KRT18P35-201ENST00000510488 1269 ntBASIC17.52■□□□□ 0.4
CCDC71Q8IV32 NAPSB-206ENST00000562112 1266 ntBASIC17.52■□□□□ 0.4
CCDC71Q8IV32 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AC092865.7-201ENST00000641832 219 ntBASIC17.52■□□□□ 0.4
CCDC71Q8IV32 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC71Q8IV32 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC71Q8IV32 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC71Q8IV32 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC71Q8IV32 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC71Q8IV32 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC71Q8IV32 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC71Q8IV32 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 KRT18P57-201ENST00000443599 1254 ntBASIC17.51■□□□□ 0.39
CCDC71Q8IV32 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AC116562.2-201ENST00000507042 360 ntBASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AL049597.2-201ENST00000565575 961 ntBASIC17.51■□□□□ 0.39
CCDC71Q8IV32 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 AP006587.1-201ENST00000534129 1502 ntBASIC17.51■□□□□ 0.39
CCDC71Q8IV32 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC71Q8IV32 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 FZD10-202ENST00000539839 3282 ntBASIC17.5■□□□□ 0.39
CCDC71Q8IV32 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 FITM1-202ENST00000559294 800 ntBASIC17.5■□□□□ 0.39
CCDC71Q8IV32 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71Q8IV32 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC71Q8IV32 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms