Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 AP005901.3-202ENST00000581653 237 ntBASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 AC138894.3-201ENST00000603787 634 ntBASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.08■□□□□ 0.81
RTN4RL1Q86UN2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4RL1Q86UN2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4RL1Q86UN2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4RL1Q86UN2 AL032819.2-201ENST00000624543 2162 ntBASIC20.08■□□□□ 0.8
RTN4RL1Q86UN2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4RL1Q86UN2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 AL592071.1-201ENST00000611956 408 ntBASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RL1Q86UN2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 KRT16P4-201ENST00000453883 522 ntBASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 AC099336.1-202ENST00000602961 463 ntBASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 HEIH-201ENST00000623091 1652 ntBASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 AL353692.3-201ENST00000407031 1396 ntBASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTN4RL1Q86UN2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 GUSBP12-201ENST00000513727 720 ntBASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 MTMR9LP-203ENST00000426597 1545 ntBASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 AC093484.2-201ENST00000580996 2166 ntBASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RL1Q86UN2 AC007952.6-201ENST00000573168 2673 ntBASIC20.04■□□□□ 0.8
RTN4RL1Q86UN2 AC003957.1-201ENST00000625108 2673 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms