Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
PPP4R3AQ6IN85 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 AC005521.1-201ENST00000393351 872 ntBASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP4R3AQ6IN85 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 AL137013.1-201ENST00000432946 1228 ntBASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 KRT18P41-201ENST00000518924 1277 ntBASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 NEK4P2-201ENST00000580004 1012 ntBASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP4R3AQ6IN85 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 AC141257.4-201ENST00000634557 245 ntBASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 AC136944.6-201ENST00000634818 245 ntBASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 AC034236.2-201ENST00000606662 1610 ntBASIC21.18■□□□□ 0.98
PPP4R3AQ6IN85 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 LIN28AP1-201ENST00000429574 405 ntBASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 KRT8P7-201ENST00000533003 1432 ntBASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 HOXB1-202ENST00000577092 1414 ntBASIC21.17■□□□□ 0.98
PPP4R3AQ6IN85 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms