Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 MIR3180-5-201ENST00000583743 153 ntBASIC19.43■□□□□ 0.7
RAB6CQ53S08 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 AC145285.6-201ENST00000604632 637 ntBASIC19.43■□□□□ 0.7
RAB6CQ53S08 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6CQ53S08 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6CQ53S08 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 AC010203.1-204ENST00000548782 407 ntBASIC19.41■□□□□ 0.7
RAB6CQ53S08 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 AC010653.2-201ENST00000623505 997 ntBASIC19.41■□□□□ 0.7
RAB6CQ53S08 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6CQ53S08 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB6CQ53S08 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6CQ53S08 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB6CQ53S08 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RAB6CQ53S08 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAB6CQ53S08 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB6CQ53S08 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6CQ53S08 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB6CQ53S08 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6CQ53S08 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB6CQ53S08 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6CQ53S08 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6CQ53S08 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6CQ53S08 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms