Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
LINC01554Q52M75 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
LINC01554Q52M75 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01554Q52M75 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
LINC01554Q52M75 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01554Q52M75 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01554Q52M75 CD276-203ENST00000537340 2439 ntTSL 2 BASIC9.4□□□□□ -0.91
LINC01554Q52M75 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
LINC01554Q52M75 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01554Q52M75 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 SERBP1P1-201ENST00000396021 1160 ntBASIC9.39□□□□□ -0.91
LINC01554Q52M75 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 SLC47A1P1-202ENST00000449666 945 ntBASIC9.39□□□□□ -0.91
LINC01554Q52M75 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 DUX4L19-201ENST00000557448 1267 ntBASIC9.39□□□□□ -0.91
LINC01554Q52M75 MIR3621-201ENST00000580529 85 ntBASIC9.39□□□□□ -0.91
LINC01554Q52M75 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 ERF-202ENST00000440177 2032 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
LINC01554Q52M75 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01554Q52M75 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms