Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 AC096733.2-201ENST00000609937 1394 ntBASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 CRYGFP-201ENST00000418459 633 ntBASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 MFAP1P1-201ENST00000442257 1255 ntBASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 WIZP1-201ENST00000531444 2299 ntBASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
KHDC1Q4VXA5 CYP2D8P-201ENST00000433633 1490 ntBASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 AC087499.1-201ENST00000418141 1075 ntBASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 AC073912.3-201ENST00000624414 853 ntBASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KHDC1Q4VXA5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KHDC1Q4VXA5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.89■□□□□ 0.62
KHDC1Q4VXA5 AL161938.1-201ENST00000569833 2180 ntBASIC18.89■□□□□ 0.62
KHDC1Q4VXA5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 CKBP1-201ENST00000565489 1086 ntBASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 AP005242.2-201ENST00000580065 1175 ntBASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KHDC1Q4VXA5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KHDC1Q4VXA5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KHDC1Q4VXA5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.88■□□□□ 0.61
KHDC1Q4VXA5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KHDC1Q4VXA5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms