Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBE3AQ05086 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
UBE3AQ05086 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
UBE3AQ05086 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3AQ05086 SAPCD2P3-201ENST00000455031 850 ntBASIC19.76■□□□□ 0.75
UBE3AQ05086 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3AQ05086 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE3AQ05086 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE3AQ05086 AC064862.7-201ENST00000604520 867 ntBASIC19.76■□□□□ 0.75
UBE3AQ05086 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3AQ05086 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBE3AQ05086 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBE3AQ05086 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE3AQ05086 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UBE3AQ05086 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3AQ05086 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
UBE3AQ05086 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3AQ05086 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 MRPL3P1-201ENST00000400109 1033 ntBASIC19.75■□□□□ 0.75
UBE3AQ05086 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UBE3AQ05086 AC079776.4-201ENST00000511039 504 ntBASIC19.75■□□□□ 0.75
UBE3AQ05086 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3AQ05086 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.75■□□□□ 0.75
UBE3AQ05086 BX640515.1-201ENST00000617215 977 ntBASIC19.75■□□□□ 0.75
UBE3AQ05086 AC124864.1-201ENST00000623408 392 ntBASIC19.75■□□□□ 0.75
UBE3AQ05086 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3AQ05086 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBE3AQ05086 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3AQ05086 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3AQ05086 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBE3AQ05086 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3AQ05086 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 AC006333.2-201ENST00000607957 2099 ntBASIC19.74■□□□□ 0.75
UBE3AQ05086 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3AQ05086 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3AQ05086 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3AQ05086 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3AQ05086 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3AQ05086 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.74■□□□□ 0.75
UBE3AQ05086 REXO1L6P-202ENST00000619970 1078 ntBASIC19.74■□□□□ 0.75
UBE3AQ05086 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE3AQ05086 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3AQ05086 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3AQ05086 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3AQ05086 HLA-A-201ENST00000376802 1334 ntBASIC19.74■□□□□ 0.75
UBE3AQ05086 FEM1AP3-201ENST00000403722 1741 ntBASIC19.73■□□□□ 0.75
UBE3AQ05086 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBE3AQ05086 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE3AQ05086 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.73■□□□□ 0.75
UBE3AQ05086 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE3AQ05086 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE3AQ05086 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE3AQ05086 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE3AQ05086 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE3AQ05086 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE3AQ05086 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE3AQ05086 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBE3AQ05086 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE3AQ05086 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE3AQ05086 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms