Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AC008556.1-201ENST00000610908 2040 ntBASIC19.92■□□□□ 0.78
CDR2Q01850 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.92■□□□□ 0.78
CDR2Q01850 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CDR2Q01850 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.92■□□□□ 0.78
CDR2Q01850 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.92■□□□□ 0.78
CDR2Q01850 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.92■□□□□ 0.78
CDR2Q01850 MYC-208ENST00000641036 567 ntBASIC19.92■□□□□ 0.78
CDR2Q01850 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDR2Q01850 AC026471.1-201ENST00000564629 3026 ntBASIC19.92■□□□□ 0.78
CDR2Q01850 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.92■□□□□ 0.78
CDR2Q01850 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 KRT8P45-201ENST00000414328 1447 ntBASIC19.92■□□□□ 0.78
CDR2Q01850 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.92■□□□□ 0.78
CDR2Q01850 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.92■□□□□ 0.78
CDR2Q01850 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
CDR2Q01850 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDR2Q01850 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDR2Q01850 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 AC135050.7-201ENST00000624508 2218 ntBASIC19.91■□□□□ 0.78
CDR2Q01850 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CDR2Q01850 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.91■□□□□ 0.78
CDR2Q01850 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDR2Q01850 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.91■□□□□ 0.78
CDR2Q01850 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDR2Q01850 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.91■□□□□ 0.78
CDR2Q01850 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.91■□□□□ 0.78
CDR2Q01850 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.91■□□□□ 0.78
CDR2Q01850 AP005242.2-201ENST00000580065 1175 ntBASIC19.91■□□□□ 0.78
CDR2Q01850 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.91■□□□□ 0.78
CDR2Q01850 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.91■□□□□ 0.78
CDR2Q01850 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 AC112777.1-201ENST00000540175 1423 ntBASIC19.91■□□□□ 0.78
CDR2Q01850 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDR2Q01850 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.91■□□□□ 0.78
CDR2Q01850 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR2Q01850 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CDR2Q01850 BICD1-207ENST00000551848 1962 ntBASIC19.9■□□□□ 0.78
CDR2Q01850 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.9■□□□□ 0.78
CDR2Q01850 AL023284.2-201ENST00000405850 579 ntBASIC19.9■□□□□ 0.78
CDR2Q01850 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 TSPY7P-201ENST00000431358 1114 ntBASIC19.9■□□□□ 0.78
CDR2Q01850 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.9■□□□□ 0.78
CDR2Q01850 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDR2Q01850 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
CDR2Q01850 GPAT2P1-201ENST00000444924 1672 ntBASIC19.9■□□□□ 0.78
CDR2Q01850 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDR2Q01850 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR2Q01850 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR2Q01850 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDR2Q01850 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDR2Q01850 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.89■□□□□ 0.77
CDR2Q01850 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR2Q01850 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDR2Q01850 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR2Q01850 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR2Q01850 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR2Q01850 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR2Q01850 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR2Q01850 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR2Q01850 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDR2Q01850 RBM17P1-201ENST00000453646 1190 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms