Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 AC007613.1-201ENST00000572811 2597 ntBASIC18.84■□□□□ 0.61
PRAMEP78395 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PRAMEP78395 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.84■□□□□ 0.61
PRAMEP78395 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.84■□□□□ 0.61
PRAMEP78395 AC026471.5-201ENST00000615068 467 ntBASIC18.84■□□□□ 0.61
PRAMEP78395 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 AP006294.2-201ENST00000641667 209 ntBASIC18.84■□□□□ 0.61
PRAMEP78395 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEP78395 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEP78395 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEP78395 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 AC096733.2-201ENST00000609937 1394 ntBASIC18.83■□□□□ 0.61
PRAMEP78395 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEP78395 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEP78395 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEP78395 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.83■□□□□ 0.61
PRAMEP78395 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEP78395 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEP78395 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.83■□□□□ 0.61
PRAMEP78395 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRAMEP78395 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.83■□□□□ 0.6
PRAMEP78395 MFAP1P1-201ENST00000442257 1255 ntBASIC18.83■□□□□ 0.6
PRAMEP78395 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.83■□□□□ 0.6
PRAMEP78395 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEP78395 AC097488.1-201ENST00000507834 756 ntBASIC18.83■□□□□ 0.6
PRAMEP78395 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEP78395 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.83■□□□□ 0.6
PRAMEP78395 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.83■□□□□ 0.6
PRAMEP78395 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
PRAMEP78395 REXO1L10P-201ENST00000615707 1290 ntBASIC18.83■□□□□ 0.6
PRAMEP78395 REXO1L12P-201ENST00000622156 912 ntBASIC18.83■□□□□ 0.6
PRAMEP78395 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.83■□□□□ 0.6
PRAMEP78395 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRAMEP78395 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRAMEP78395 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PRAMEP78395 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEP78395 KRT8P32-201ENST00000512863 1461 ntBASIC18.83■□□□□ 0.6
PRAMEP78395 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEP78395 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEP78395 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEP78395 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEP78395 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEP78395 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEP78395 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEP78395 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEP78395 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEP78395 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms