Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.95■□□□□ 0.94
TPM4P67936 HEIH-201ENST00000623091 1652 ntBASIC20.95■□□□□ 0.94
TPM4P67936 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPM4P67936 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TPM4P67936 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TPM4P67936 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.94
TPM4P67936 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.95■□□□□ 0.94
TPM4P67936 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TPM4P67936 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TPM4P67936 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 AL162430.1-201ENST00000480705 870 ntBASIC20.94■□□□□ 0.94
TPM4P67936 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.94■□□□□ 0.94
TPM4P67936 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.94■□□□□ 0.94
TPM4P67936 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.94■□□□□ 0.94
TPM4P67936 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.94■□□□□ 0.94
TPM4P67936 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TPM4P67936 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM4P67936 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM4P67936 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.93■□□□□ 0.94
TPM4P67936 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM4P67936 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
TPM4P67936 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM4P67936 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM4P67936 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM4P67936 AC026185.1-201ENST00000445748 174 ntBASIC20.93■□□□□ 0.94
TPM4P67936 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM4P67936 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM4P67936 PNMA6B-201ENST00000538162 1200 ntBASIC20.93■□□□□ 0.94
TPM4P67936 RARRES2P6-201ENST00000567333 442 ntBASIC20.93■□□□□ 0.94
TPM4P67936 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
TPM4P67936 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TPM4P67936 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.93■□□□□ 0.94
TPM4P67936 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM4P67936 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM4P67936 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.93■□□□□ 0.94
TPM4P67936 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.93■□□□□ 0.94
TPM4P67936 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM4P67936 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TPM4P67936 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TPM4P67936 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TPM4P67936 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM4P67936 AC026271.2-201ENST00000428091 497 ntBASIC20.92■□□□□ 0.94
TPM4P67936 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.92■□□□□ 0.94
TPM4P67936 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.92■□□□□ 0.94
TPM4P67936 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.92■□□□□ 0.94
TPM4P67936 AC060766.5-201ENST00000590539 871 ntBASIC20.92■□□□□ 0.94
TPM4P67936 AC022517.1-201ENST00000592429 346 ntBASIC20.92■□□□□ 0.94
TPM4P67936 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TPM4P67936 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM4P67936 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TPM4P67936 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.91■□□□□ 0.94
TPM4P67936 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms