Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SEC61A1P61619 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SEC61A1P61619 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SEC61A1P61619 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SEC61A1P61619 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.36■□□□□ 0.21
SEC61A1P61619 PKD1P1-201ENST00000458669 6805 ntBASIC16.36■□□□□ 0.21
SEC61A1P61619 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.35■□□□□ 0.21
SEC61A1P61619 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SEC61A1P61619 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.35■□□□□ 0.21
SEC61A1P61619 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.35■□□□□ 0.21
SEC61A1P61619 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.35■□□□□ 0.21
SEC61A1P61619 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SEC61A1P61619 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SEC61A1P61619 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.35■□□□□ 0.21
SEC61A1P61619 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.35■□□□□ 0.21
SEC61A1P61619 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.35■□□□□ 0.21
SEC61A1P61619 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
SEC61A1P61619 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61A1P61619 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.35■□□□□ 0.21
SEC61A1P61619 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 AC006333.2-201ENST00000607957 2099 ntBASIC16.34■□□□□ 0.21
SEC61A1P61619 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.34■□□□□ 0.21
SEC61A1P61619 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.34■□□□□ 0.21
SEC61A1P61619 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.34■□□□□ 0.21
SEC61A1P61619 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.34■□□□□ 0.21
SEC61A1P61619 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.34■□□□□ 0.21
SEC61A1P61619 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.34■□□□□ 0.21
SEC61A1P61619 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.34■□□□□ 0.21
SEC61A1P61619 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SEC61A1P61619 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.34■□□□□ 0.21
SEC61A1P61619 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.34■□□□□ 0.21
SEC61A1P61619 AP001412.1-201ENST00000608405 714 ntBASIC16.34■□□□□ 0.21
SEC61A1P61619 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.34■□□□□ 0.21
SEC61A1P61619 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.34■□□□□ 0.21
SEC61A1P61619 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SEC61A1P61619 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61A1P61619 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61A1P61619 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61A1P61619 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
SEC61A1P61619 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61A1P61619 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.33■□□□□ 0.21
SEC61A1P61619 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61A1P61619 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61A1P61619 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61A1P61619 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SEC61A1P61619 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SEC61A1P61619 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 FAM197Y1-201ENST00000421178 764 ntBASIC16.33■□□□□ 0.2
SEC61A1P61619 TSPY15P-201ENST00000457163 923 ntBASIC16.33■□□□□ 0.2
SEC61A1P61619 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.33■□□□□ 0.2
SEC61A1P61619 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.33■□□□□ 0.2
SEC61A1P61619 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.33■□□□□ 0.2
SEC61A1P61619 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.33■□□□□ 0.2
SEC61A1P61619 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.33■□□□□ 0.2
SEC61A1P61619 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.33■□□□□ 0.2
SEC61A1P61619 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.33■□□□□ 0.2
SEC61A1P61619 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms