Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2A1P52655 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2A1P52655 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
GTF2A1P52655 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.35■□□□□ 0.53
GTF2A1P52655 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GTF2A1P52655 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GTF2A1P52655 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2A1P52655 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2A1P52655 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GTF2A1P52655 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2A1P52655 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2A1P52655 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2A1P52655 AL512353.2-201ENST00000448759 1962 ntBASIC18.35■□□□□ 0.53
GTF2A1P52655 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2A1P52655 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2A1P52655 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2A1P52655 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2A1P52655 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GTF2A1P52655 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.34■□□□□ 0.53
GTF2A1P52655 GUSBP5-201ENST00000418136 578 ntBASIC18.34■□□□□ 0.53
GTF2A1P52655 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.34■□□□□ 0.53
GTF2A1P52655 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 AC011298.3-201ENST00000615796 283 ntBASIC18.34■□□□□ 0.53
GTF2A1P52655 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GTF2A1P52655 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GTF2A1P52655 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2A1P52655 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
GTF2A1P52655 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
GTF2A1P52655 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2A1P52655 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2A1P52655 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.33■□□□□ 0.53
GTF2A1P52655 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2A1P52655 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
GTF2A1P52655 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
GTF2A1P52655 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2A1P52655 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.33■□□□□ 0.52
GTF2A1P52655 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.33■□□□□ 0.52
GTF2A1P52655 DUX4L19-201ENST00000557448 1267 ntBASIC18.33■□□□□ 0.52
GTF2A1P52655 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.33■□□□□ 0.52
GTF2A1P52655 AL035685.1-201ENST00000636663 812 ntBASIC18.33■□□□□ 0.52
GTF2A1P52655 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2A1P52655 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2A1P52655 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2A1P52655 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GTF2A1P52655 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.33■□□□□ 0.52
GTF2A1P52655 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2A1P52655 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2A1P52655 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GTF2A1P52655 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2A1P52655 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GTF2A1P52655 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.32■□□□□ 0.52
GTF2A1P52655 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GTF2A1P52655 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.32■□□□□ 0.52
GTF2A1P52655 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.32■□□□□ 0.52
GTF2A1P52655 MIR4466-201ENST00000606121 54 ntBASIC18.32■□□□□ 0.52
GTF2A1P52655 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GTF2A1P52655 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
GTF2A1P52655 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.32■□□□□ 0.52
GTF2A1P52655 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GTF2A1P52655 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GTF2A1P52655 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.32■□□□□ 0.52
GTF2A1P52655 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GTF2A1P52655 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GTF2A1P52655 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.31■□□□□ 0.52
GTF2A1P52655 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GTF2A1P52655 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GTF2A1P52655 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms